Mass Spectrometry Software

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Welcome to MassAI

MassAI is a bioinformatics tool for analysing datasets from tandem
mass spectrometry. From simple to complex samples, protein to
proteome - MassAI identifies proteins,  peptides and PTMs in your
MS/MS datasets.

MassAI also handles non-standard modifications, including cross-
linking, glycosylations and HDX; ideal if you want to investigate protein
structure, interaction or dynamics.

MassAI is flexible when reporting your search results. From a broad
overview of results, you can zoom in on each protein, peptide, scan or
PTM. All is annotated in detail, and presented in formats that are easy
to include into to your report,  paper or presentation.

MassAI is developed at the University of Southern Denmark, and is